dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00897
Location and strand information: 76961 - 77404 (+)
Family: 3.A.1.1.4
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00898
Location and strand information: 77417 - 78262 (+)
Family: 3.A.1.1.18
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00899
Location and strand information: 78274 - 80388 (+)
Family: GH3
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.7486
Protein molecular weight: 77806.64
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00900
Location and strand information: 80470 - 81942 (+)
Family: GH43_12
Protein type: CAZyme
Protein description: Non-reducing end alpha-L-arabinofuranosidase BoGH43A
Protein isoelectric point: 5.1618
Protein molecular weight: 56266.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00901
Location and strand information: 81939 - 82865 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00902
Location and strand information: 82922 - 84472 (-)
Family: 3.A.1.120.6
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YbiT

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00903
Location and strand information: 84639 - 85127 (+)
Family: MarR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00904
Location and strand information: 85111 - 87444 (+)
Family: 2.A.6.3.6
Protein type: TC
Protein description: Multidrug resistance protein MdtC

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00905
Location and strand information: 87441 - 89429 (+)
Family: 2.A.6.3.6
Protein type: TC
Protein description: Swarming motility protein SwrC

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00906
Location and strand information: 89559 - 90755 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00907
Location and strand information: 90868 - 91662 (+)
Family: 3.A.1.132.3
Protein type: TC
Protein description: Iron-sulfur cluster carrier protein

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00908
Location and strand information: 91761 - 92528 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00909
Location and strand information: 93145 - 95082 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 4.9313
Protein molecular weight: 72926.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00910
Location and strand information: 95061 - 97217 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00911
Location and strand information: 97198 - 98463 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00912
Location and strand information: 98569 - 99432 (+)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00913
Location and strand information: 99434 - 99586 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002277_4|CGC1
Gene ID: MGYG000002277_00914
Location and strand information: 99625 - 100257 (+)
Family: 3.A.1.1.41
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002277_00897	Lactose transport system permease protein LacF	TC	76961	77404	+	3.A.1.1.4
MGYG000002277_00898	L-arabinose transport system permease protein AraQ	TC	77417	78262	+	3.A.1.1.18
MGYG000002277_00899	hypothetical protein	CAZyme	78274	80388	+	GH3
MGYG000002277_00900	Non-reducing end alpha-L-arabinofuranosidase BoGH43A	CAZyme	80470	81942	+	GH43_12
MGYG000002277_00901	hypothetical protein	null	81939	82865	+	Lactamase_B
MGYG000002277_00902	putative ABC transporter ATP-binding protein YbiT	TC	82922	84472	-	3.A.1.120.6
MGYG000002277_00903	hypothetical protein	TF	84639	85127	+	MarR
MGYG000002277_00904	Multidrug resistance protein MdtC	TC	85111	87444	+	2.A.6.3.6
MGYG000002277_00905	Swarming motility protein SwrC	TC	87441	89429	+	2.A.6.3.6
MGYG000002277_00906	hypothetical protein	null	89559	90755	+	No domain
MGYG000002277_00907	Iron-sulfur cluster carrier protein	TC	90868	91662	+	3.A.1.132.3
MGYG000002277_00908	hypothetical protein	null	91761	92528	-	Lysozyme_like
MGYG000002277_00909	Non-reducing end beta-L-arabinofuranosidase	CAZyme	93145	95082	+	GH127
MGYG000002277_00910	hypothetical protein	null	95061	97217	+	No domain
MGYG000002277_00911	hypothetical protein	STP	97198	98463	+	SBP_bac_1
MGYG000002277_00912	Lactose transport system permease protein LacF	TC	98569	99432	+	3.A.1.1.11
MGYG000002277_00913	hypothetical protein	null	99434	99586	+	No domain
MGYG000002277_00914	L-arabinose transport system permease protein AraQ	TC	99625	100257	+	3.A.1.1.41
Protein ID	Protein Name	Type	Start	End	Strand	Signature